nf-core_modules/tests/modules/haplogrep2/classify/main.nf
Lucpen cad9133c71
Add haplogrep2 (#2030)
* feat added haplogrep classify

* feat made module

* fix added correct container

* feat removed md5sum

* fix trying to fix issue with version.yml

* fix some small things

* fix version

* fix on meta.yml

* fix stub run

* fix Apply suggestions from code review

Co-authored-by: Ramprasad Neethiraj <20065894+ramprasadn@users.noreply.github.com>

* fix Apply suggestions from code review2

Co-authored-by: Ramprasad Neethiraj <20065894+ramprasadn@users.noreply.github.com>

Co-authored-by: Taniguti <ltaniguti@gmail.com>
Co-authored-by: Ramprasad Neethiraj <20065894+ramprasadn@users.noreply.github.com>
2022-09-14 14:58:02 +02:00

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Text

#!/usr/bin/env nextflow
nextflow.enable.dsl = 2
include { HAPLOGREP2_CLASSIFY } from '../../../../modules/haplogrep2/classify/main.nf'
workflow test_haplogrep2_classify {
input = [
[ id:'test', single_end:false ], // meta map
file(params.test_data['homo_sapiens']['illumina']['test_mito_vcf'], checkIfExists: true)
]
format = 'vcf'
HAPLOGREP2_CLASSIFY ( input,format )
}