nf-core_modules/tests/software/nextclade/test.yml
Harshil Patel b6e4ecabba
Add Nextclade module (#484)
* Bump pangolin version

* Add nextclade to software list

* Add nextclade module

* Update md5sum for Pangolin due to version bump

* Adding some URL to meta.yml

* Adding new line at end of file

Co-authored-by: JoseEspinosa <kadomu@gmail.com>
2021-05-06 15:48:15 +01:00

31 lines
1 KiB
YAML
Executable file

- name: nextclade test_nextclade_json
command: nextflow run tests/software/nextclade -entry test_nextclade_json -c tests/config/nextflow.config
tags:
- nextclade
files:
- path: output/nextclade/test.json
md5sum: cab92830c5cb66076e7d6c054ea98362
- name: nextclade test_nextclade_csv
command: nextflow run tests/software/nextclade -entry test_nextclade_csv -c tests/config/nextflow.config
tags:
- nextclade
files:
- path: output/nextclade/test.csv
md5sum: 4f7096df9be51f99a0d62a38653b29cf
- name: nextclade test_nextclade_tsv
command: nextflow run tests/software/nextclade -entry test_nextclade_tsv -c tests/config/nextflow.config
tags:
- nextclade
files:
- path: output/nextclade/test.tsv
md5sum: fe07dc4ffcd81742ca9bef93f88e8836
- name: nextclade test_nextclade_tree
command: nextflow run tests/software/nextclade -entry test_nextclade_tree -c tests/config/nextflow.config
tags:
- nextclade
files:
- path: output/nextclade/test.tree.json
md5sum: 508a6ea19daf98fd8ae9f2d470f8c3cd