nf-core_modules/tests/software/rseqc/readduplication/test.yml
Kevin Menden 1d874bb0d0
Finish rseqc modules (#439)
* initial 'modules create' of minia

* fixed tests

* finished meta.yml

* fixed filters.yml

* resolved issues in pytest_software.yml

* add newline

* Update software/minia/main.nf

* fixing a bunch of module tests

* remove vscode

* fixed minia

* added rseqc/bamstat tests

* added tests/meta.yml for rseqc/inferexperiment

* added test/meta.yml for rseqc/inner_distances

* added meta.yml and tests/main.nf for junctionannotation (test not running)

* added test/meta.yml for rseqc/readdistribution

* finished test/meta.yml for rseqc/readduplication

* added entries to pytest_software.yml

Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com>
2021-04-13 08:49:32 +01:00

13 lines
566 B
YAML

- name: rseqc readduplication test_rseqc_readduplication
command: nextflow run tests/software/rseqc/readduplication -entry test_rseqc_readduplication -c tests/config/nextflow.config
tags:
- rseqc/readduplication
- rseqc
files:
- path: output/rseqc/test.DupRate_plot.pdf
- path: output/rseqc/test.DupRate_plot.r
md5sum: 3c0325095cee4835b921e57d61c23dca
- path: output/rseqc/test.pos.DupRate.xls
md5sum: a859bc2031d46bf1cc4336205847caa3
- path: output/rseqc/test.seq.DupRate.xls
md5sum: ee8783399eec5a18522a6f08bece338b