mirror of
https://github.com/MillironX/nf-core_modules.git
synced 2024-11-14 05:43:08 +00:00
4422454ba5
* output constant sites as a val as well as a file so it can be passed into iqtree * Using an env variable because that's far safer! * Update software/snpsites/main.nf * remove hardcoded param that should be a user option * Update software/snpsites/main.nf Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com>
9 lines
No EOL
343 B
YAML
9 lines
No EOL
343 B
YAML
- name: snpsites
|
|
command: nextflow run ./tests/software/snpsites -entry test_snpsites -c tests/config/nextflow.config
|
|
tags:
|
|
- snpsites
|
|
files:
|
|
- path: output/snpsites/filtered_alignment.fas
|
|
md5sum: f96c7513003e878e16fa9eac9fcda0f4
|
|
- path: output/snpsites/constant.sites.txt
|
|
md5sum: 8b9b226e3787f7baaefce07405af22c9 |