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20 lines
453 B
Text
20 lines
453 B
Text
#!/usr/bin/env nextflow
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nextflow.enable.dsl = 2
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include { AMPIR } from '../../../modules/ampir/main.nf'
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workflow test_ampir {
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fasta = [ [ id:'test', single_end:false ], // meta map
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file(params.test_data['candidatus_portiera_aleyrodidarum']['genome']['proteome_fasta'], checkIfExists: true),
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]
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model = "precursor"
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min_length = []
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min_probability = "0.7"
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AMPIR ( fasta, model, min_length, min_probability )
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}
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