mirror of
https://github.com/MillironX/nf-core_modules.git
synced 2024-12-26 23:43:19 -05:00
36 lines
902 B
YAML
36 lines
902 B
YAML
name: star_genomegenerate
|
|
description: Create index for STAR
|
|
keywords:
|
|
- index
|
|
- fasta
|
|
- genome
|
|
- reference
|
|
tools:
|
|
- star:
|
|
description: |
|
|
STAR is a software package for mapping DNA sequences against
|
|
a large reference genome, such as the human genome.
|
|
homepage: https://github.com/alexdobin/STAR
|
|
manual: https://github.com/alexdobin/STAR/blob/master/doc/STARmanual.pdf
|
|
doi: 10.1093/bioinformatics/bts635
|
|
input:
|
|
- fasta:
|
|
type: file
|
|
description: Fasta file of the reference genome
|
|
- gtf:
|
|
type: file
|
|
description: GTF file of the reference genome
|
|
|
|
output:
|
|
- index:
|
|
type: directory
|
|
description: Folder containing the star index files
|
|
pattern: "star"
|
|
- version:
|
|
type: file
|
|
description: File containing software version
|
|
pattern: "*.{version.txt}"
|
|
|
|
authors:
|
|
- "@kevinmenden"
|
|
- "@drpatelh"
|