nf-core_modules/tests/software/sequenzautils/bam2seqz/test.yml at cd8bacc90a7c40755455542b7151679db9c2c691 - millironx/nf-core_modules - Milliron X Code: Code hosting for cattle or technology, but especially anything to do with both of them

millironx/nf-core_modules

mirror of https://github.com/MillironX/nf-core_modules.git synced 2024-11-14 05:43:08 +00:00

Harshil Patel 5e18e36895

Update and check tests are running for all modules (#420 )

* Fixes for PR 371

* Fix tags

* Add md5sum

* Add md5sums for stringtie

* Fix tests for modules where subtool = build

* Fix pytest_software name conflicts

* Change _ to / in test.yml tags

* Nope...that didnt work

* Fix sequenzautils/bam2seqz tests

2021-04-09 13:47:05 +01:00

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 - name: sequenzautils bam2seqz
   command: nextflow run ./tests/software/sequenzautils/bam2seqz -entry test_sequenzautils_bam2seqz -c tests/config/nextflow.config
   tags:
     - sequenzautils
     - sequenzautils/bam2seqz
   files:
     - path: output/sequenzautils/test.seqz.gz
       md5sum: 12b41979a498ac10c0aff162b12e6a6e