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17 lines
No EOL
561 B
Text
17 lines
No EOL
561 B
Text
#!/usr/bin/env nextflow
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nextflow.enable.dsl = 2
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include { PICARD_COLLECTMULTIPLEMETRICS } from '../../../../software/picard/collectmultiplemetrics/main.nf' addParams( options: [:] )
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workflow test_picard_collectmultiplemetrics {
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def input = []
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input = [ [ id:'test', single_end:false ], // meta map
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file("${launchDir}/tests/data/bam/test.paired_end.name.sorted.bam", checkIfExists: true) ]
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PICARD_COLLECTMULTIPLEMETRICS (
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input,
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file("${launchDir}/tests/data/fasta/E_coli/NC_010473.fa", checkIfExists: true)
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)
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} |