nf-core_modules/software/bedtools/merge/main.nf
2020-07-14 16:49:06 +02:00

17 lines
295 B
Text

process BEDTOOLS_MERGE {
tag { input_file }
container 'quay.io/biocontainers/bedtools:2.29.2--hc088bd4_0'
input:
path (input_file)
val (bedtools_merge_args)
output:
stdout()
script:
"""
bedtools merge -i ${input_file} ${bedtools_merge_args}
"""
}