mirror of
https://github.com/MillironX/nf-core_modules.git
synced 2024-11-14 13:43:09 +00:00
acb1a12a56
* Re-organise all test data * Fix ECLint * Fix ECLint agaaainn * Now is not the time EClint
22 lines
723 B
Text
22 lines
723 B
Text
#!/usr/bin/env nextflow
|
|
|
|
nextflow.enable.dsl = 2
|
|
|
|
include { UNICYCLER } from '../../../software/unicycler/main.nf' addParams( options: [:] )
|
|
|
|
workflow test_unicycler_single_end {
|
|
input = [ [ id:'test', single_end:true ], // meta map
|
|
[ file("${launchDir}/tests/data/generic/fastq/test_R1.fastq.gz", checkIfExists: true) ]
|
|
]
|
|
|
|
UNICYCLER ( input )
|
|
}
|
|
|
|
workflow test_unicycler_paired_end {
|
|
input = [ [ id:'test', single_end:false ], // meta map
|
|
[ file("${launchDir}/tests/data/generic/fastq/test_R1.fastq.gz", checkIfExists: true),
|
|
file("${launchDir}/tests/data/generic/fastq/test_R2.fastq.gz", checkIfExists: true) ]
|
|
]
|
|
|
|
UNICYCLER ( input )
|
|
}
|