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21 lines
587 B
Text
21 lines
587 B
Text
#!/usr/bin/env nextflow
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nextflow.enable.dsl = 2
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include { GATK4_REVERTSAM } from '../../../../modules/gatk4/revertsam/main.nf'
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workflow test_gatk4_revertsam {
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input = [ [ id:'test' ], // meta map
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file(params.test_data['sarscov2']['illumina']['test_paired_end_bam'], checkIfExists: true)
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]
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GATK4_REVERTSAM ( input )
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}
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workflow test_gatk4_revertsam_stubs {
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input = [ [ id:'test' ], // meta map
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file(params.test_data['sarscov2']['illumina']['test_paired_end_bam'], checkIfExists: true)
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]
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GATK4_REVERTSAM ( input )
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}
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