mirror of
https://github.com/MillironX/nf-core_modules.git
synced 2024-12-23 11:38:17 +00:00
e937c7950a
* Update README * Rename pytest_software.yml to pytest_modules.yml * Rename main software directory to modules * Remove deprecated modules * Rename tests software to modules * Replace paths for tests in pytest_modules.yml * Replace software with modules in Github Actions * Replace software with modules in main.nf tests * Rename software to modules in test.yml
38 lines
1.1 KiB
YAML
38 lines
1.1 KiB
YAML
name: raxmlng
|
|
description: RAxML-NG is a phylogenetic tree inference tool which uses maximum-likelihood (ML) optimality criterion.
|
|
keywords:
|
|
- phylogeny
|
|
- newick
|
|
- maximum likelihood
|
|
tools:
|
|
- raxmlng:
|
|
description: RAxML-NG is a phylogenetic tree inference tool which uses maximum-likelihood (ML) optimality criterion.
|
|
homepage: https://github.com/amkozlov/raxml-ng
|
|
documentation: https://github.com/amkozlov/raxml-ng/wiki
|
|
tool_dev_url: https://github.com/amkozlov/raxml-ng
|
|
doi: doi.org/10.1093/bioinformatics/btz305
|
|
licence: ['GPL v2-or-later']
|
|
|
|
input:
|
|
- alignment:
|
|
type: file
|
|
description: A FASTA format multiple sequence alignment file
|
|
pattern: "*.{fasta,fas,fa,mfa}"
|
|
|
|
output:
|
|
- version:
|
|
type: file
|
|
description: File containing software version
|
|
pattern: "*.{version.txt}"
|
|
- phylogeny:
|
|
type: file
|
|
description: A phylogeny in Newick format
|
|
pattern: "*.{raxml.bestTree}"
|
|
- phylogeny_bootstrapped:
|
|
type: file
|
|
description: A phylogeny in Newick format with bootstrap values
|
|
pattern: "*.{raxml.support}"
|
|
|
|
authors:
|
|
- "@avantonder"
|
|
- "@aunderwo"
|