nf-core_modules/tests/modules/gstama/polyacleanup/main.nf
Sébastien Guizard 794f84534b
New Module: gstama/polyacleanup (#1468)
* 📦 NEW: Add gstama/polyacleanup

polyacleanup script remove remaining polyA tails from FLNC reads (Pacbio isoseq3)

* 🐛 FIX: Prettier: replace simple quote by double quote

* 🐛 FIX: Update TEMPLATE to nf-core 2.4

* 👌 IMPROVE: Compress outputs

Co-authored-by: Sateesh Peri <33637490+sateeshperi@users.noreply.github.com>
2022-03-31 09:11:51 -04:00

15 lines
368 B
Text

#!/usr/bin/env nextflow
nextflow.enable.dsl = 2
include { GSTAMA_POLYACLEANUP } from '../../../../modules/gstama/polyacleanup/main.nf'
workflow test_gstama_polyacleanup {
input = [
[ id:'test' ], // meta map
file(params.test_data['homo_sapiens']['genome']['transcriptome_fasta'], checkIfExists: true)
]
GSTAMA_POLYACLEANUP ( input )
}