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3531824af8
* Update DIAMOND module to output log file * Updating DIAMOND module to output log file - with jfy133 suggestions Co-authored-by: Mahwash Jamy <mahwashjamy@n183-p186.eduroam.kth.se> Co-authored-by: James A. Fellows Yates <jfy133@gmail.com>
21 lines
903 B
YAML
21 lines
903 B
YAML
- name: diamond blastx test_diamond_blastx
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command: nextflow run ./tests/modules/diamond/blastx -entry test_diamond_blastx -c ./tests/config/nextflow.config -c ./tests/modules/diamond/blastx/nextflow.config
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tags:
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- diamond
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- diamond/blastx
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files:
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- path: output/diamond/proteome.fasta.dmnd
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- path: output/diamond/test.diamond_blastx.log
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contains: ["queries aligned"]
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- path: output/diamond/test.diamond_blastx.txt
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- name: diamond blastx test_diamond_blastx_daa
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command: nextflow run ./tests/modules/diamond/blastx -entry test_diamond_blastx_daa -c ./tests/config/nextflow.config -c ./tests/modules/diamond/blastx/nextflow.config
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tags:
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- diamond
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- diamond/blastx
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files:
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- path: output/diamond/proteome.fasta.dmnd
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- path: output/diamond/test.diamond_blastx.daa
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- path: output/diamond/test.diamond_blastx.log
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contains: ["queries aligned"]
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