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7f7f6bc913
* Add hamronization/abricate * Update input pattern in meta.yml * Update location of hamronization test data * Apply suggestions from code review
15 lines
445 B
Text
15 lines
445 B
Text
#!/usr/bin/env nextflow
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nextflow.enable.dsl = 2
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include { HAMRONIZATION_ABRICATE } from '../../../../modules/hamronization/abricate/main.nf'
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workflow test_hamronization_abricate {
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input = [
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[ id:'test', single_end:false ], // meta map
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file(params.test_data['bacteroides_fragilis']['hamronization']['genome_abricate_tsv'], checkIfExists: true),
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]
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HAMRONIZATION_ABRICATE ( input, 'tsv', '1.0.1', '2021-Mar-27' )
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}
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