nf-core_modules/modules/nanolyse/meta.yml

name: nanolyse
description: DNA contaminant removal using NanoLyse
keywords:
    - contaminant_removal
tools:
    - nanolyse:
        description: |
            DNA contaminant removal using NanoLyse            
        homepage: https://github.com/wdecoster/nanolyse
        documentation: https://github.com/wdecoster/nanolyse#nanolyse
input:
    - meta:
        type: map
        description: |
            Groovy Map containing sample information
            e.g. [ id:'test', single_end:false ]            
    - fastq:
        type: file
        description: |
            Basecalled reads in FASTQ.GZ format            
        pattern: "*.fastq.gz"
    - fasta:
        type: file
        description: |
            A reference fasta file against which to filter.            
        pattern: "*.fasta"
output:
    - meta:
        type: map
        description: |
            Groovy Map containing sample information
            e.g. [ id:'test', single_end:false ]            
    - fastq:
        type: file
        description: Reads with contaminants removed in FASTQ format
        pattern: "*.fastq.gz"
    - log:
        type: file
        description: Log of the Nanolyse run.
        pattern: "*.log"
    - versions:
        type: file
        description: File containing software versions
        pattern: "versions.yml"
authors:
    - "@yuukiiwa"