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22 lines
607 B
Text
22 lines
607 B
Text
#!/usr/bin/env nextflow
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nextflow.enable.dsl = 2
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include { GATK4_COMPOSESTRTABLEFILE } from '../../../../modules/gatk4/composestrtablefile/main.nf'
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workflow test_gatk4_composestrtablefile {
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fasta = [
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file(params.test_data['homo_sapiens']['genome']['genome_fasta'], checkIfExists: true)
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]
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fasta_fai = [
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file(params.test_data['homo_sapiens']['genome']['genome_fasta_fai'], checkIfExists: true)
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]
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dict = [
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file(params.test_data['homo_sapiens']['genome']['genome_dict'], checkIfExists: true)
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]
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GATK4_COMPOSESTRTABLEFILE ( fasta, fasta_fai, dict )
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}
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