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d8ba32c6b5
* Working version of somalier relate * few changes * new changes * corrected test.yml * updated container paths and file paths * changed container and inputFile paths * changed left padding * requested changes * Update modules/somalier/relate/main.nf Co-authored-by: James A. Fellows Yates <jfy133@gmail.com> * Update modules/somalier/relate/main.nf Co-authored-by: James A. Fellows Yates <jfy133@gmail.com> * Update modules/somalier/relate/main.nf Co-authored-by: James A. Fellows Yates <jfy133@gmail.com> * Update modules/somalier/relate/main.nf Co-authored-by: James A. Fellows Yates <jfy133@gmail.com> * Update modules/somalier/relate/meta.yml Co-authored-by: James A. Fellows Yates <jfy133@gmail.com> * Update modules/somalier/relate/meta.yml Co-authored-by: James A. Fellows Yates <jfy133@gmail.com> * Update modules/somalier/relate/meta.yml Co-authored-by: James A. Fellows Yates <jfy133@gmail.com> * requested changes * requested changes Co-authored-by: James A. Fellows Yates <jfy133@gmail.com>
25 lines
1.1 KiB
YAML
25 lines
1.1 KiB
YAML
- name: somalier relate test_somalier_relate
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command: nextflow run ./tests/modules/somalier/relate/main.nf -c ./tests/config/nextflow.config -c ./tests/modules/somalier/relate/nextflow.config -entry test_somalier_relate
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tags:
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- somalier/relate
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- somalier
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files:
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- path: output/somalier/cohort.html
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md5sum: 03cac9b2c67a8a06f63e07f83ee11e18
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- path: output/somalier/cohort.pairs.tsv
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md5sum: 54d1e9fca1bf9d747d4254c6fa98edcf
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- path: output/somalier/cohort.samples.tsv
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md5sum: 97257d88886db1325c4d7d10cefa7169
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- name: somalier relate test_somalier_relate_ped_groups
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command: nextflow run ./tests/modules/somalier/relate/main.nf -c ./tests/config/nextflow.config -c ./tests/modules/somalier/relate/nextflow.config -entry test_somalier_relate_ped_groups
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tags:
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- somalier/relate
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- somalier
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files:
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- path: output/somalier/cohort.html
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md5sum: 0d573016c9279ccdfdcfd4eb01d73b89
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- path: output/somalier/cohort.pairs.tsv
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md5sum: 8655714f1e5359329188e9f501168131
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- path: output/somalier/cohort.samples.tsv
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md5sum: 38ef93340e55fbeef47640abda9e48b0
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