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2456ef7d99
* Add eido/validate module * Apply first batch of updates after code review * Remove readlink, update sed, update paths * Move sample table index parameter to config * Update tests/modules/eido/validate/test.yml Co-authored-by: James A. Fellows Yates <jfy133@gmail.com> * Update tests/modules/eido/validate/test.yml Co-authored-by: James A. Fellows Yates <jfy133@gmail.com> * Update tests/modules/eido/validate/test.yml Co-authored-by: James A. Fellows Yates <jfy133@gmail.com> * Update tests/modules/eido/validate/test.yml Co-authored-by: James A. Fellows Yates <jfy133@gmail.com> * Update modules/eido/validate/main.nf Co-authored-by: James A. Fellows Yates <jfy133@gmail.com> Co-authored-by: James A. Fellows Yates <jfy133@gmail.com>
8 lines
196 B
Text
8 lines
196 B
Text
process {
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publishDir = { "${params.outdir}/${task.process.tokenize(':')[-1].tokenize('_')[0].toLowerCase()}" }
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withName: 'EIDO_VALIDATE' {
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ext.args = '--st-index sample'
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}
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}
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