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2456ef7d99
* Add eido/validate module * Apply first batch of updates after code review * Remove readlink, update sed, update paths * Move sample table index parameter to config * Update tests/modules/eido/validate/test.yml Co-authored-by: James A. Fellows Yates <jfy133@gmail.com> * Update tests/modules/eido/validate/test.yml Co-authored-by: James A. Fellows Yates <jfy133@gmail.com> * Update tests/modules/eido/validate/test.yml Co-authored-by: James A. Fellows Yates <jfy133@gmail.com> * Update tests/modules/eido/validate/test.yml Co-authored-by: James A. Fellows Yates <jfy133@gmail.com> * Update modules/eido/validate/main.nf Co-authored-by: James A. Fellows Yates <jfy133@gmail.com> Co-authored-by: James A. Fellows Yates <jfy133@gmail.com>
17 lines
755 B
YAML
17 lines
755 B
YAML
- name: eido validate test_eido_validate_on_nextflow_samplesheet
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command: nextflow run ./tests/modules/eido/validate -entry test_eido_validate_on_nextflow_samplesheet -c ./tests/config/nextflow.config -c ./tests/modules/eido/validate/nextflow.config
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tags:
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- eido/validate
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- eido
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files:
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- path: output/eido/validation.log
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md5sum: 3a197c21ebf411aac7616bf9b4470de3
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- name: eido validate test_eido_validate_on_pep_config
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command: nextflow run ./tests/modules/eido/validate -entry test_eido_validate_on_pep_config -c ./tests/config/nextflow.config -c ./tests/modules/eido/validate/nextflow.config
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tags:
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- eido/validate
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- eido
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files:
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- path: output/eido/validation.log
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md5sum: 3a197c21ebf411aac7616bf9b4470de3
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