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e745e167c1
* fix yml formatting * allow fastq.gz and fq.gz as file input, add meta.yml and test * fix yaml files * Revert "allow fastq.gz and fq.gz as file input, add meta.yml and test" This reverts commit 34002d7a7a8c7f7bb4600c3377f35c87849f71a4. * prettier magic! * fix comments for yamllint * remove node version number * fix linting errors Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com>
33 lines
789 B
YAML
33 lines
789 B
YAML
name: chromap_index
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description: Indexes a fasta reference genome ready for chromatin profiling.
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keywords:
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- index
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- fasta
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- genome
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- reference
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tools:
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- chromap:
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description: Fast alignment and preprocessing of chromatin profiles
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homepage: https://github.com/haowenz/chromap
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documentation: https://github.com/haowenz/chromap
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tool_dev_url: https://github.com/haowenz/chromap
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doi: ""
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licence: ["GPL v3"]
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input:
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- fasta:
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type: file
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description: Fasta reference file.
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output:
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- versions:
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type: file
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description: File containing software versions
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pattern: "versions.yml"
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- index:
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type: file
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description: Index file of the reference genome
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pattern: "*.{index}"
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authors:
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- "@mahesh-panchal"
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