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https://github.com/MillironX/nf-core_modules.git
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29 lines
1.1 KiB
YAML
29 lines
1.1 KiB
YAML
- name: gatk4 applybqsr test_gatk4_applybqsr
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command: nextflow run tests/modules/gatk4/applybqsr -entry test_gatk4_applybqsr -c tests/config/nextflow.config -c ./tests/modules/gatk4/applybqsr/nextflow.config
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tags:
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- gatk4
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- gatk4/applybqsr
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files:
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- path: output/gatk4/test.bam
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md5sum: e11b7eaf2034740a953626518e3c3d6e
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- path: output/gatk4/versions.yml
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- name: gatk4 applybqsr test_gatk4_applybqsr_intervals
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command: nextflow run tests/modules/gatk4/applybqsr -entry test_gatk4_applybqsr_intervals -c tests/config/nextflow.config -c ./tests/modules/gatk4/applybqsr/nextflow.config
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tags:
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- gatk4
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- gatk4/applybqsr
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files:
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- path: output/gatk4/test.bam
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md5sum: e9e9aa753c106e43f936ad573e23d2e6
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- path: output/gatk4/versions.yml
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- name: gatk4 applybqsr test_gatk4_applybqsr_cram
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command: nextflow run tests/modules/gatk4/applybqsr -entry test_gatk4_applybqsr_cram -c tests/config/nextflow.config -c ./tests/modules/gatk4/applybqsr/nextflow.config
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tags:
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- gatk4
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- gatk4/applybqsr
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files:
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- path: output/gatk4/test.cram
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md5sum: bca9d234a5d484ce2a6f4826ca2ea308
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- path: output/gatk4/versions.yml
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