mirror of
https://github.com/MillironX/nf-core_modules.git
synced 2024-09-21 07:42:05 +00:00
35 lines
754 B
YAML
35 lines
754 B
YAML
name: cutadapt
|
|
on:
|
|
push:
|
|
paths:
|
|
- software/cutadapt/**
|
|
- .github/workflows/cutadapt.yml
|
|
- tests
|
|
pull_request:
|
|
paths:
|
|
- software/cutadapt/**
|
|
- .github/workflows/cutadapt.yml
|
|
- tests
|
|
|
|
jobs:
|
|
run_ci_test:
|
|
runs-on: ubuntu-latest
|
|
env:
|
|
NXF_ANSI_LOG: false
|
|
steps:
|
|
- uses: actions/checkout@v2
|
|
|
|
- name: Install Nextflow
|
|
run: |
|
|
wget -qO- get.nextflow.io | bash
|
|
sudo mv nextflow /usr/local/bin/
|
|
|
|
- name: Test module with paired-end data
|
|
run: |
|
|
cd software/cutadapt/test/
|
|
nextflow run .
|
|
|
|
- name: Test module with single-end data
|
|
run: |
|
|
cd software/cutadapt/test/
|
|
nextflow run . --single_end
|