mirror of
https://github.com/MillironX/nf-core_modules.git
synced 2024-12-25 20:08:17 +00:00
07c0830057
* chore: apply module template * refactor: add NCBI settings to options * docs: complete meta information * feat: add prefetch process * fix: correct bash commands * tests: define the right tests * style: move option definition to satisfy linting * fix: extract version correctly * fix: correct newline issues * refactor: address review comments * Apply suggestions from code review * chore: add retrying via nf-core label * refactor: validate download thoroughly * refactor: remove vdb-config input Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com>
15 lines
324 B
Text
15 lines
324 B
Text
#!/usr/bin/env nextflow
|
|
|
|
nextflow.enable.dsl = 2
|
|
|
|
include { SRATOOLS_PREFETCH } from '../../../../modules/sratools/prefetch/main.nf' addParams( options: [:] )
|
|
|
|
workflow test_sratools_prefetch {
|
|
|
|
input = [
|
|
[ id:'test', single_end:false ], // meta map
|
|
'ERR2815334'
|
|
]
|
|
|
|
SRATOOLS_PREFETCH ( input )
|
|
}
|