Moritz E. Beber de997825de Add a new module for fasterq-dump (#807) ... * chore: use template to create fasterq module * feat: add fasterq-dump process module * docs: provide input and output descriptions * docs: add comment on `--temp` * fix: use correct variable * tests: define test output * refactor: address review comments * refactor: remove vdb-config input * chore: add new test data to config * tests: define single-end and paired-end cases * refactor: choose specific output * tests: do not expect single FASTQ for paired-end * feat: add compression * Apply suggestions from code review Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com> * tests: revert the test data name * Apply suggestions from code review Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com>		2021-10-12 14:20:58 +01:00
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fasterqdump	Add a new module for fasterq-dump (#807)	2021-10-12 14:20:58 +01:00
prefetch	Add a module for sra-tools prefetch (#714)	2021-10-11 22:30:41 +01:00