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nf-core_modules/tests
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Moritz E. Beber de997825de
Add a new module for fasterq-dump (#807) 
* chore: use template to create fasterq module

* feat: add fasterq-dump process module

* docs: provide input and output descriptions

* docs: add comment on `--temp`

* fix: use correct variable

* tests: define test output

* refactor: address review comments

* refactor: remove vdb-config input

* chore: add new test data to config

* tests: define single-end and paired-end cases

* refactor: choose specific output

* tests: do not expect single FASTQ for paired-end

* feat: add compression

* Apply suggestions from code review

Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com>

* tests: revert the test data name

* Apply suggestions from code review

Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com>
2021-10-12 14:20:58 +01:00
..
config Add a new module for fasterq-dump (#807) 2021-10-12 14:20:58 +01:00
modules Add a new module for fasterq-dump (#807) 2021-10-12 14:20:58 +01:00
subworkflows/nf-core Subworkflow Infrastructure (#662) 2021-10-08 16:02:42 +01:00
test_versions_yml.py Subworkflow Infrastructure (#662) 2021-10-08 16:02:42 +01:00