mirror of
https://github.com/MillironX/nf-core_modules.git
synced 2024-11-15 06:03:10 +00:00
c2bba7a65d
* add clonalframeml module * Update main.nf * try recommended gzip * Update main.nf Co-authored-by: Chris Cheshire <chris.j.cheshire@gmail.com>
14 lines
570 B
Text
14 lines
570 B
Text
#!/usr/bin/env nextflow
|
|
|
|
nextflow.enable.dsl = 2
|
|
|
|
include { CLONALFRAMEML } from '../../../modules/clonalframeml/main.nf' addParams( options: [:] )
|
|
|
|
workflow test_clonalframeml {
|
|
|
|
input = [ [ id:'test' ], // meta map
|
|
file("https://github.com/bactopia/bactopia-tests/raw/main/data/species/haemophilus_influenzae/genome/genome_msa.newick", checkIfExists: true),
|
|
file("https://github.com/bactopia/bactopia-tests/raw/main/data/species/haemophilus_influenzae/genome/genome_msa.fa.gz", checkIfExists: true),]
|
|
|
|
CLONALFRAMEML ( input )
|
|
}
|