mirror of
https://github.com/MillironX/nf-core_modules.git
synced 2024-12-23 11:38:17 +00:00
f3ffa69b8d
* feat(dragmap): Add initial hastable module * feat(dragmap): Add initial align module * test(dragmap): Remove md5sum Forgot sam files have a header. Might pipe this through samtools. * build(dragmap): Add mulled container * chore(dragmap): Update prefix * feat(dragmap): Output a bam file * feat(dragmap): Add log files * Update modules/dragmap/align/meta.yml Co-authored-by: Jose Espinosa-Carrasco <kadomu@gmail.com>
30 lines
838 B
YAML
30 lines
838 B
YAML
name: dragmap_hashtable
|
|
description: Create DRAGEN hashtable for reference genome
|
|
keywords:
|
|
- index
|
|
- fasta
|
|
- genome
|
|
- reference
|
|
tools:
|
|
- dragmap:
|
|
description: Dragmap is the Dragen mapper/aligner Open Source Software.
|
|
homepage: https://github.com/Illumina/dragmap
|
|
documentation: https://github.com/Illumina/dragmap
|
|
tool_dev_url: https://github.com/Illumina/dragmap#basic-command-line-usage
|
|
doi: ""
|
|
licence: ['GPL v3']
|
|
input:
|
|
- fasta:
|
|
type: file
|
|
description: Input genome fasta file
|
|
output:
|
|
- hashmap:
|
|
type: file
|
|
description: DRAGMAP hash table
|
|
pattern: "*.{cmp,.bin,.txt}"
|
|
- versions:
|
|
type: file
|
|
description: File containing software versions
|
|
pattern: "versions.yml"
|
|
authors:
|
|
- "@Emiller88"
|