mirror of
https://github.com/MillironX/nf-core_modules.git
synced 2024-12-23 11:38:17 +00:00
32 lines
837 B
YAML
32 lines
837 B
YAML
name: bwameth_index
|
|
description: Performs indexing of c2t converted reference genome
|
|
keywords:
|
|
- bwameth
|
|
- 3-letter genome
|
|
- index
|
|
- methylseq
|
|
- bisulphite
|
|
- fasta
|
|
tools:
|
|
- bwameth:
|
|
description: |
|
|
Fast and accurate alignment of BS-Seq reads
|
|
using bwa-mem and a 3-letter genome.
|
|
homepage: https://github.com/brentp/bwa-meth
|
|
documentation: https://github.com/brentp/bwa-meth
|
|
arxiv: arXiv:1401.1129
|
|
input:
|
|
- fasta:
|
|
type: file
|
|
description: Input genome fasta file
|
|
output:
|
|
- index:
|
|
type: dir
|
|
description: Directory containing bwameth genome index
|
|
pattern: "index"
|
|
- version:
|
|
type: file
|
|
description: File containing software version
|
|
pattern: "*.{version.txt}"
|
|
authors:
|
|
- "@phue"
|