mirror of
https://github.com/MillironX/nf-core_modules.git
synced 2024-12-23 11:38:17 +00:00
14 lines
471 B
Text
14 lines
471 B
Text
#!/usr/bin/env nextflow
|
|
|
|
nextflow.enable.dsl = 2
|
|
|
|
include { BEDTOOLS_MASKFASTA } from '../../../../software/bedtools/maskfasta/main.nf' addParams( options: [:] )
|
|
|
|
workflow test_bedtools_maskfasta {
|
|
bed = [ [ id:'test'],
|
|
file(params.test_data['sarscov2']['genome']['test_bed'], checkIfExists: true)
|
|
]
|
|
fasta = file(params.test_data['sarscov2']['genome']['genome_fasta'], checkIfExists: true)
|
|
|
|
BEDTOOLS_MASKFASTA ( bed, fasta )
|
|
}
|