nf-core_modules/modules/seqtk/mergepe
emnilsson 9402595711
New module seqtk/mergepe (#951)
* First step into creating a seqtk/mergepe module to interleave fastQ input

* First rewrite of main.nf to make the module perform the desired (interleave/merge of pe reads) task

* Modifications to test the new seqtk/mergepe module.

* Improving the seqtk/mergepe module to output single end reads as well, and making sure tests work

* Modified so that gzip uses -n and that single read entries are symlinked with ln -s instead of copied, therefore updated test.yml as well.

* Fix trailing whitespaces

Co-authored-by: Daniel Lundin <daniel.lundin@lnu.se>
2021-10-28 16:53:33 +02:00
..
functions.nf New module seqtk/mergepe (#951) 2021-10-28 16:53:33 +02:00
main.nf New module seqtk/mergepe (#951) 2021-10-28 16:53:33 +02:00
meta.yml New module seqtk/mergepe (#951) 2021-10-28 16:53:33 +02:00