nf-core_modules/tests/modules/hmmcopy/gccounter/test.yml at e687c4b97faedfdef5ccc64f7542b6f539d8fbd8 - millironx/nf-core_modules - Milliron X Code: Code hosting for cattle or technology, but especially anything to do with both of them

millironx/nf-core_modules

mirror of https://github.com/MillironX/nf-core_modules.git synced 2024-12-25 20:08:17 +00:00

Simon Pearce cac6dc83bb

gccounter module for hmmcopy (#1003 )

* hmmcopy gccounter working

* Update modules/hmmcopy/gccounter/main.nf

Co-authored-by: Chris Cheshire <chris.j.cheshire@gmail.com>

* Update main.nf

Changed version to 0.1.1 as the container says

Co-authored-by: Simon Pearce <simon.pearce@cruk.manchester.ac.uk>
Co-authored-by: Chris Cheshire <chris.j.cheshire@gmail.com>

2021-11-02 09:59:25 +00:00

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 - name: hmmcopy gccounter test_hmmcopy_gccounter
   command: nextflow run tests/modules/hmmcopy/gccounter -entry test_hmmcopy_gccounter -c tests/config/nextflow.config
   tags:
     - hmmcopy
     - hmmcopy/gccounter
   files:
     - path: output/hmmcopy/genome.gc.wig
       md5sum: 59ad14bc5aaa903187d7b248c9490deb