nf-core_modules/modules/star/genomegenerate/meta.yml
Matthias Hörtenhuber e745e167c1
Fix formatting in yaml files, add yamllint config (#1279)
* fix yml formatting

* allow fastq.gz and fq.gz as file input, add meta.yml and test

* fix yaml files

* Revert "allow fastq.gz and fq.gz as file input, add meta.yml and test"

This reverts commit 34002d7a7a8c7f7bb4600c3377f35c87849f71a4.

* prettier magic!

* fix comments for yamllint

* remove node version number

* fix linting errors

Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com>
2022-02-15 11:15:27 +00:00

37 lines
924 B
YAML

name: star_genomegenerate
description: Create index for STAR
keywords:
- index
- fasta
- genome
- reference
tools:
- star:
description: |
STAR is a software package for mapping DNA sequences against
a large reference genome, such as the human genome.
homepage: https://github.com/alexdobin/STAR
manual: https://github.com/alexdobin/STAR/blob/master/doc/STARmanual.pdf
doi: 10.1093/bioinformatics/bts635
licence: ["MIT"]
input:
- fasta:
type: file
description: Fasta file of the reference genome
- gtf:
type: file
description: GTF file of the reference genome
output:
- index:
type: directory
description: Folder containing the star index files
pattern: "star"
- versions:
type: file
description: File containing software versions
pattern: "versions.yml"
authors:
- "@kevinmenden"
- "@drpatelh"