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https://github.com/MillironX/nf-core_modules.git
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e745e167c1
* fix yml formatting * allow fastq.gz and fq.gz as file input, add meta.yml and test * fix yaml files * Revert "allow fastq.gz and fq.gz as file input, add meta.yml and test" This reverts commit 34002d7a7a8c7f7bb4600c3377f35c87849f71a4. * prettier magic! * fix comments for yamllint * remove node version number * fix linting errors Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com>
11 lines
521 B
YAML
11 lines
521 B
YAML
- name: lofreq callparallel test_lofreq_callparallel
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command: nextflow run ./tests/modules/lofreq/callparallel -entry test_lofreq_callparallel -c ./tests/config/nextflow.config -c ./tests/modules/lofreq/callparallel/nextflow.config
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tags:
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- lofreq/callparallel
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- lofreq
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files:
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- path: output/lofreq/test.vcf.gz
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contains:
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[
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'##INFO=<ID=CONSVAR,Number=0,Type=Flag,Description="Indicates that the variant is a consensus variant (as opposed to a low frequency variant).">',
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]
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