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nf-core_modules/modules/samtools
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Harshil Patel e751e5040a
Bump software versions for viralrecon modules (#1198) 
* Bump software versions for viralrecon modules

* Remove custom params.save_unaligned from bowtie2_align

* Unify samtools modules and error if input and output names are the same

* Fix ALL the tests
2022-01-07 17:52:39 +00:00
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ampliconclip Bump software versions for viralrecon modules (#1198) 2022-01-07 17:52:39 +00:00
bam2fq Bump software versions for viralrecon modules (#1198) 2022-01-07 17:52:39 +00:00
depth Bump software versions for viralrecon modules (#1198) 2022-01-07 17:52:39 +00:00
faidx Bump software versions for viralrecon modules (#1198) 2022-01-07 17:52:39 +00:00
fastq Bump software versions for viralrecon modules (#1198) 2022-01-07 17:52:39 +00:00
fixmate Bump software versions for viralrecon modules (#1198) 2022-01-07 17:52:39 +00:00
flagstat Bump software versions for viralrecon modules (#1198) 2022-01-07 17:52:39 +00:00
idxstats Bump software versions for viralrecon modules (#1198) 2022-01-07 17:52:39 +00:00
index Bump software versions for viralrecon modules (#1198) 2022-01-07 17:52:39 +00:00
merge Bump software versions for viralrecon modules (#1198) 2022-01-07 17:52:39 +00:00
mpileup Change syntax from task.ext.suffix to tast.ext.prefix in all modules (#1110) 2021-12-02 12:39:55 +00:00
sort Bump software versions for viralrecon modules (#1198) 2022-01-07 17:52:39 +00:00
stats Bump software versions for viralrecon modules (#1198) 2022-01-07 17:52:39 +00:00
view Bump software versions for viralrecon modules (#1198) 2022-01-07 17:52:39 +00:00