nf-core_modules/tests/modules/bcftools/mpileup/test.yml
Harshil Patel e751e5040a
Bump software versions for viralrecon modules (#1198)
* Bump software versions for viralrecon modules

* Remove custom params.save_unaligned from bowtie2_align

* Unify samtools modules and error if input and output names are the same

* Fix ALL the tests
2022-01-07 17:52:39 +00:00

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YAML

- name: bcftools mpileup test_bcftools_mpileup
command: nextflow run ./tests/modules/bcftools/mpileup -entry test_bcftools_mpileup -c ./tests/config/nextflow.config -c ./tests/modules/bcftools/mpileup/nextflow.config
tags:
- bcftools/mpileup
- bcftools
files:
- path: output/bcftools/test.bcftools_stats.txt
md5sum: 72c506e633413c6b439f95336933984e
- path: output/bcftools/test.vcf.gz.tbi
md5sum: ae0f17dcc2cb27034d848699b824c516
- path: output/bcftools/test.vcf.gz
md5sum: e9e520663875c66296f3bff0fa226c40