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https://github.com/MillironX/nf-core_modules.git
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e751e5040a
* Bump software versions for viralrecon modules * Remove custom params.save_unaligned from bowtie2_align * Unify samtools modules and error if input and output names are the same * Fix ALL the tests
17 lines
765 B
YAML
17 lines
765 B
YAML
- name: samtools stats test_samtools_stats
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command: nextflow run ./tests/modules/samtools/stats -entry test_samtools_stats -c ./tests/config/nextflow.config -c ./tests/modules/samtools/stats/nextflow.config
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tags:
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- samtools/stats
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- samtools
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files:
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- path: output/samtools/test.paired_end.sorted.bam.stats
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md5sum: 09146eeecfcae2a84fb8615c86cd8d64
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- name: samtools stats test_samtools_stats_cram
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command: nextflow run ./tests/modules/samtools/stats -entry test_samtools_stats_cram -c ./tests/config/nextflow.config -c ./tests/modules/samtools/stats/nextflow.config
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tags:
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- samtools/stats
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- samtools
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files:
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- path: output/samtools/test.paired_end.recalibrated.sorted.cram.stats
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md5sum: ab49e7380714b7033e374ba1114e5e54
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