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* first draft * fix test run * Apply suggestions from code review Co-authored-by: Jose Espinosa-Carrasco <kadomu@gmail.com> * Update tests/modules/ataqv/mkarv/test.yml * Update tests/modules/ataqv/mkarv/test.yml * Update tests/modules/ataqv/mkarv/test.yml * Update tests/modules/ataqv/mkarv/test.yml * Update tests/modules/ataqv/mkarv/test.yml * Update modules/ataqv/mkarv/nextflow.config * Delete nextflow.config * Update tests/modules/ataqv/mkarv/test.yml * fix linting * fix linting Co-authored-by: bjlang <> Co-authored-by: Jose Espinosa-Carrasco <kadomu@gmail.com>
31 lines
1,011 B
YAML
31 lines
1,011 B
YAML
name: "ataqv_mkarv"
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description: mkarv function of a corresponding ataqv tool
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keywords:
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- mkarv
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tools:
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- "ataqv":
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description: "ataqv is a toolkit for measuring and comparing ATAC-seq results. It was written to help understand how well ATAC-seq assays have worked, and to make it easier to spot differences that might be caused by library prep or sequencing."
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homepage: "https://github.com/ParkerLab/ataqv/blob/master/README.rst"
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documentation: "https://github.com/ParkerLab/ataqv/blob/master/README.rst"
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tool_dev_url: "https://github.com/ParkerLab/ataqv"
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doi: ""
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licence: "['GPL v3']"
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input:
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- json:
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type: file
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description: The JSON file with ataqv metrics
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pattern: "*.json"
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output:
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- versions:
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type: file
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description: File containing software versions
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pattern: "versions.yml"
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- html:
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type: directory
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description: Web application to visualize results in HTML format
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pattern: "*.html"
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authors:
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- "@bjlang"
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