nf-core_modules/tests/software/seacr/main.nf
2020-12-17 14:20:24 +00:00

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#!/usr/bin/env nextflow
nextflow.enable.dsl = 2
include { SEACR_CALLPEAK } from '../../../software/seacr/callpeak/main.nf' addParams( options: [ args:'norm stringent' ] )
workflow test_seacr_callpeak {
def input = []
input = [[ id:'test_1'],
file("${launchDir}/tests/data/bedgraph/K27me3_1_to_chr20.bedgraph", checkIfExists: true),
file("${launchDir}/tests/data/bedgraph/IgG_1_to_chr20.bedgraph", checkIfExists: true) ]
SEACR_CALLPEAK ( input )
}
// For local testing
workflow {
test_seacr_callpeak()
}