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90b203d3e9
* tool: elprep split * fixes for testing * fix tests * fix test outputs * create test-yaml * fix suggestions by @jfy133 Co-authored-by: James A. Fellows Yates <jfy133@gmail.com>
9 lines
217 B
Text
9 lines
217 B
Text
process {
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publishDir = { "${params.outdir}/${task.process.tokenize(':')[-1].tokenize('_')[0].toLowerCase()}" }
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withName : ELPREP_SPLIT {
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ext.args = "--contig-group-size 1 --output-type bam"
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}
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}
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