nf-core_modules/modules/preseq/lcextrap/meta.yml
Harshil Patel e937c7950a
Rename software/ directory to modules/ to re-organise module structure (#567)
* Update README

* Rename pytest_software.yml to pytest_modules.yml

* Rename main software directory to modules

* Remove deprecated modules

* Rename tests software to modules

* Replace paths for tests in pytest_modules.yml

* Replace software with modules in Github Actions

* Replace software with modules in main.nf tests

* Rename software to modules in test.yml
2021-07-07 10:10:18 +01:00

47 lines
1.2 KiB
YAML
Executable file

name: preseq_lcextrap
description: Software for predicting library complexity and genome coverage in high-throughput sequencing
keywords:
- preseq
- library
- complexity
tools:
- preseq:
description: Software for predicting library complexity and genome coverage in high-throughput sequencing
homepage: http://smithlabresearch.org/software/preseq/
documentation: None
tool_dev_url: None
doi: ""
licence: ['GPL']
input:
- meta:
type: map
description: |
Groovy Map containing sample information
e.g. [ id:'test', single_end:false ]
- bam:
type: file
description: BAM/CRAM/SAM file
pattern: "*.{bam,cram,sam}"
output:
- meta:
type: map
description: |
Groovy Map containing sample information
e.g. [ id:'test', single_end:false ]
- version:
type: file
description: File containing software version
pattern: "*.{version.txt}"
- ccurve:
type: file
description: File containing output of Preseq lcextrap
pattern: "*.{ccurve.txt}"
- log:
type: file
description: Log file containing stderr produced by Preseq
pattern: "*.{log}"
authors:
- "@drpatelh"