nf-core_modules/modules/salmon/index/meta.yml
Harshil Patel e937c7950a
Rename software/ directory to modules/ to re-organise module structure (#567)
* Update README

* Rename pytest_software.yml to pytest_modules.yml

* Rename main software directory to modules

* Remove deprecated modules

* Rename tests software to modules

* Replace paths for tests in pytest_modules.yml

* Replace software with modules in Github Actions

* Replace software with modules in main.nf tests

* Rename software to modules in test.yml
2021-07-07 10:10:18 +01:00

35 lines
883 B
YAML

name: salmon_index
description: Create index for salmon
keywords:
- index
- fasta
- genome
- reference
tools:
- salmon:
description: |
Salmon is a tool for wicked-fast transcript quantification from RNA-seq data
homepage: https://salmon.readthedocs.io/en/latest/salmon.html
manual: https://salmon.readthedocs.io/en/latest/salmon.html
doi: 10.1038/nmeth.4197
input:
- genome_fasta:
type: file
description: Fasta file of the reference genome
- transcriptome_fasta:
type: file
description: Fasta file of the reference transcriptome
output:
- index:
type: directory
description: Folder containing the star index files
pattern: "salmon"
- version:
type: file
description: File containing software version
pattern: "*.{version.txt}"
authors:
- "@kevinmenden"
- "@drpatelh"