mirror of
https://github.com/MillironX/nf-core_modules.git
synced 2024-11-11 12:43:09 +00:00
e937c7950a
* Update README * Rename pytest_software.yml to pytest_modules.yml * Rename main software directory to modules * Remove deprecated modules * Rename tests software to modules * Replace paths for tests in pytest_modules.yml * Replace software with modules in Github Actions * Replace software with modules in main.nf tests * Rename software to modules in test.yml
46 lines
1 KiB
YAML
Executable file
46 lines
1 KiB
YAML
Executable file
name: ucsc_bed12tobigbed
|
|
description: Convert file from bed12 to bigBed format
|
|
keywords:
|
|
- bed12
|
|
- bigbed
|
|
tools:
|
|
- ucsc:
|
|
description: Convert file from bed12 to bigBed format
|
|
homepage: None
|
|
documentation: None
|
|
tool_dev_url: None
|
|
doi: ""
|
|
licence: ["varies; see http://genome.ucsc.edu/license"]
|
|
|
|
input:
|
|
- meta:
|
|
type: map
|
|
description: |
|
|
Groovy Map containing sample information
|
|
e.g. [ id:'test', single_end:false ]
|
|
- bed:
|
|
type: file
|
|
description: bed12 file
|
|
pattern: "*.{bed,bed12}"
|
|
- sizes:
|
|
type: file
|
|
description: chromosome sizes file
|
|
pattern: "*.{sizes}"
|
|
|
|
output:
|
|
- meta:
|
|
type: map
|
|
description: |
|
|
Groovy Map containing sample information
|
|
e.g. [ id:'test', single_end:false ]
|
|
- version:
|
|
type: file
|
|
description: File containing software version
|
|
pattern: "*.{version.txt}"
|
|
- bigbed:
|
|
type: file
|
|
description: bigBed file
|
|
pattern: "*.{bigBed}"
|
|
|
|
authors:
|
|
- "@drpatelh"
|