millironx/nf-core_modules
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nf-core_modules/tests/modules/gatk4
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Harshil Patel e937c7950a
Rename software/ directory to modules/ to re-organise module structure (#567) 
* Update README

* Rename pytest_software.yml to pytest_modules.yml

* Rename main software directory to modules

* Remove deprecated modules

* Rename tests software to modules

* Replace paths for tests in pytest_modules.yml

* Replace software with modules in Github Actions

* Replace software with modules in main.nf tests

* Rename software to modules in test.yml
2021-07-07 10:10:18 +01:00
..
applybqsr Rename software/ directory to modules/ to re-organise module structure (#567) 2021-07-07 10:10:18 +01:00
baserecalibrator Rename software/ directory to modules/ to re-organise module structure (#567) 2021-07-07 10:10:18 +01:00
bedtointervallist Rename software/ directory to modules/ to re-organise module structure (#567) 2021-07-07 10:10:18 +01:00
createsequencedictionary Rename software/ directory to modules/ to re-organise module structure (#567) 2021-07-07 10:10:18 +01:00
fastqtosam Rename software/ directory to modules/ to re-organise module structure (#567) 2021-07-07 10:10:18 +01:00
haplotypecaller Rename software/ directory to modules/ to re-organise module structure (#567) 2021-07-07 10:10:18 +01:00
intervallisttools Rename software/ directory to modules/ to re-organise module structure (#567) 2021-07-07 10:10:18 +01:00
markduplicates Rename software/ directory to modules/ to re-organise module structure (#567) 2021-07-07 10:10:18 +01:00
mergebamalignment Rename software/ directory to modules/ to re-organise module structure (#567) 2021-07-07 10:10:18 +01:00
mergevcfs Rename software/ directory to modules/ to re-organise module structure (#567) 2021-07-07 10:10:18 +01:00
revertsam Rename software/ directory to modules/ to re-organise module structure (#567) 2021-07-07 10:10:18 +01:00
samtofastq Rename software/ directory to modules/ to re-organise module structure (#567) 2021-07-07 10:10:18 +01:00
splitncigarreads Rename software/ directory to modules/ to re-organise module structure (#567) 2021-07-07 10:10:18 +01:00
variantfiltration Rename software/ directory to modules/ to re-organise module structure (#567) 2021-07-07 10:10:18 +01:00