nf-core_modules/tests/modules/fastawindows/main.nf
Matthieu Muffato 4f78d40b11
New module: fasta_windows (#1956)
* New module for fasta_windows

* Upgraded the code and the test to v2.4

* Standard list of Fasta file extensions

Co-authored-by: James A. Fellows Yates <jfy133@gmail.com>

* Output file (and/or directory) names SHOULD just consist of only ${prefix}

Co-authored-by: James A. Fellows Yates <jfy133@gmail.com>
2022-09-09 08:41:38 +01:00

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#!/usr/bin/env nextflow
nextflow.enable.dsl = 2
include { FASTAWINDOWS } from '../../../modules/fastawindows/main.nf'
workflow test_fastawindows {
input = [
[ id:'test' ], // meta map
file(params.test_data['sarscov2']['genome']['genome_fasta'], checkIfExists: true)
]
FASTAWINDOWS ( input )
}