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e745e167c1
* fix yml formatting * allow fastq.gz and fq.gz as file input, add meta.yml and test * fix yaml files * Revert "allow fastq.gz and fq.gz as file input, add meta.yml and test" This reverts commit 34002d7a7a8c7f7bb4600c3377f35c87849f71a4. * prettier magic! * fix comments for yamllint * remove node version number * fix linting errors Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com>
51 lines
1.3 KiB
YAML
51 lines
1.3 KiB
YAML
name: csvtk_concat
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description: Concatenate two or more CSV (or TSV) tables into a single table
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keywords:
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- concatenate
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- tsv
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- csv
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tools:
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- csvtk:
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description: A cross-platform, efficient, practical CSV/TSV toolkit
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homepage: http://bioinf.shenwei.me/csvtk
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documentation: http://bioinf.shenwei.me/csvtk
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tool_dev_url: https://github.com/shenwei356/csvtk
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doi: ""
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licence: ["MIT"]
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input:
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- meta:
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type: map
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description: |
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Groovy Map containing sample information
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e.g. [ id:'test', single_end:false ]
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- csv:
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type: file
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description: CSV/TSV formatted files
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pattern: "*.{csv,tsv}"
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- in_format:
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type: string
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description: Input format (csv, tab, or a delimiting character)
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pattern: "*"
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- out_format:
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type: string
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description: Output format (csv, tab, or a delimiting character)
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pattern: "*"
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output:
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- meta:
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type: map
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description: |
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Groovy Map containing sample information
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e.g. [ id:'test', single_end:false ]
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- versions:
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type: file
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description: File containing software versions
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pattern: "version.yml"
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- csv:
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type: file
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description: Concatenated CSV/TSV file
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pattern: "*.{csv,tsv}"
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authors:
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- "@rpetit3"
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