mirror of
https://github.com/MillironX/nf-core_modules.git
synced 2024-11-15 06:03:10 +00:00
07e2868920
* When the `-i` option of bgzip is given, an index is created and needs to be considered an output * It is not necessary to use a subfolder * Updated meta.yml too * Also check that an index name hasn't been requested Co-authored-by: FriederikeHanssen <Friederike.hanssen@qbic.uni-tuebingen.de>
28 lines
1.1 KiB
YAML
28 lines
1.1 KiB
YAML
- name: tabix bgzip compress
|
|
command: nextflow run ./tests/modules/tabix/bgzip -entry test_tabix_bgzip_compress -c ./tests/config/nextflow.config -c ./tests/modules/tabix/bgzip/nextflow.config
|
|
tags:
|
|
- tabix
|
|
- tabix/bgzip
|
|
files:
|
|
- path: ./output/tabix/test.vcf.gz
|
|
md5sum: fc178eb342a91dc0d1d568601ad8f8e2
|
|
- path: ./output/tabix/test.vcf.gz.gzi
|
|
should_exist: false
|
|
- name: tabix bgzip compress gzi
|
|
command: nextflow run ./tests/modules/tabix/bgzip -entry test_tabix_bgzip_compress_gzi -c ./tests/config/nextflow.config -c ./tests/modules/tabix/bgzip/nextflow.config
|
|
tags:
|
|
- tabix
|
|
- tabix/bgzip
|
|
files:
|
|
- path: ./output/tabix/test.vcf.gz
|
|
md5sum: fc178eb342a91dc0d1d568601ad8f8e2
|
|
- path: ./output/tabix/test.vcf.gz.gzi
|
|
md5sum: 7dea362b3fac8e00956a4952a3d4f474
|
|
- name: tabix bgzip decompress
|
|
command: nextflow run ./tests/modules/tabix/bgzip -entry test_tabix_bgzip_decompress -c ./tests/config/nextflow.config -c ./tests/modules/tabix/bgzip/nextflow.config
|
|
tags:
|
|
- tabix
|
|
- tabix/bgzip
|
|
files:
|
|
- path: ./output/tabix/test.bed
|
|
md5sum: fe4053cf4de3aebbdfc3be2efb125a74
|