.. |
abacas
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
adapterremoval
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
agrvate
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
allelecounter
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
amps
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
arriba
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
artic
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
bamaligncleaner
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
bamtools/split
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New module: bamtools/split (#798)
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2021-10-12 14:43:08 +02:00 |
bandage/image
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
bbmap
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Fix bug with SortMeRna not working on a single db file (#788)
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2021-10-04 12:37:21 +01:00 |
bcftools
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Add bcftools/index (#812)
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2021-10-13 10:40:04 +02:00 |
bedtools
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
bismark
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
blast
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
bowtie
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
bowtie2
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
bwa
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
bwamem2
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
bwameth
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
cat
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
chromap
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
cnvkit
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
cooler
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
csvtk/concat
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patch output extension in csvtk/concat (#797)
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2021-10-05 22:15:08 +01:00 |
custom/dumpsoftwareversions
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Correct parsing versions with trailing zeros (#795)
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2021-10-06 08:16:36 +02:00 |
cutadapt
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
damageprofiler
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fix: reduce number of required input files for damage profiler (#612)
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2021-10-20 10:02:30 +02:00 |
deeptools
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
delly/call
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
diamond
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
dragonflye
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
dshbio
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
ensemblvep
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
expansionhunter
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
fastani
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
fastp
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
fastqc
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
fasttree
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
fgbio
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
flash
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
freebayes
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New module: freebayes (#818)
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2021-10-20 15:19:31 +02:00 |
gatk4
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Learnreadorientationmodel (#794)
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2021-10-07 13:55:06 +01:00 |
genmap
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
gffread
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
glnexus
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
graphmap2
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
gtdbtk/classifywf
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Add gtdbtk/classifywf module (#765)
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2021-10-05 21:23:01 +01:00 |
gubbins
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
gunzip
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
hicap
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add hicap module (#772)
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2021-10-05 21:42:09 +01:00 |
hifiasm
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
hisat2
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
hmmer/hmmalign
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
homer
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
iqtree
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
ismapper
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add ismapper module (#773)
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2021-10-05 21:55:41 +01:00 |
isoseq3
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Update isoseq3/cluster (#856)
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2021-10-14 11:07:53 +01:00 |
ivar
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
kallisto/index
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
kallistobustools
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
kleborate
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
kraken2/kraken2
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
last
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
lib
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Bulk update modules to use versions.yml (#739)
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2021-09-27 09:41:24 +01:00 |
lima
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
lofreq
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
macs2/callpeak
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Remove def software lines and emit versions channel as plural (#780)
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2021-10-01 14:04:56 +01:00 |
malt
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
maltextract
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
mash/sketch
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
mashtree
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add mashtree module (#767)
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2021-10-05 21:27:30 +01:00 |
megahit
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Add MEGAHIT (#810)
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2021-10-12 16:06:06 +01:00 |
metaphlan3
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
methyldackel
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
minia
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
minimap2
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
mlst
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added classic mlst module (#742)
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2021-10-05 20:49:46 +01:00 |
mosdepth
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
msisensor
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
multiqc
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
muscle
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
nanolyse
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
nanoplot
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
nextclade
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
optitype
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
pairix
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
pairtools
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
pangolin
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
pbbam/pbmerge
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New module: pbbam/pbmerge (#752)
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2021-10-05 23:16:45 +01:00 |
pbccs
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
phantompeakqualtools
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Remove def software lines and emit versions channel as plural (#780)
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2021-10-01 14:04:56 +01:00 |
picard
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
pirate
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add pirate module (#777)
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2021-10-05 22:28:25 +01:00 |
plasmidid
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
plink/vcf
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
preseq/lcextrap
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
prodigal
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
prokka
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
pycoqc
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
pydamage
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
qcat
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
qualimap
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
quast
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
rapidnj
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
rasusa
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
raxmlng
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
roary
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add roary module (#776)
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2021-10-05 22:08:47 +01:00 |
rsem
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
rseqc
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
salmon
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
samtools
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
seacr/callpeak
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
seqkit/split2
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
seqtk
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
sequenzautils
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
seqwish/induce
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
shovill
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
snpdists
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
snpeff
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
snpsites
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
sortmerna
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Fix sortmerna docker container pointer (#791)
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2021-10-05 12:05:37 +02:00 |
spades
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
spatyper
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add spatyper module (#784)
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2021-10-05 22:21:35 +01:00 |
sratools
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Add a new module for fasterq-dump (#807)
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2021-10-12 14:20:58 +01:00 |
staphopiasccmec
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
star
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
strelka
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Add strelka/somatic module (#866)
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2021-10-18 22:34:23 +01:00 |
stringtie
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
subread/featurecounts
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
tabix
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
tiddit
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Add TIDDIT cov (#822)
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2021-10-13 12:59:35 +02:00 |
trimgalore
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
ucsc
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
umitools
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Remove def software lines and emit versions channel as plural (#780)
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2021-10-01 14:04:56 +01:00 |
unicycler
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
untar
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
unzip
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
variantbam
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
vcftools
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |
yara
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Update versions key in meta.yml for all modules (#787)
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2021-10-03 08:20:26 +01:00 |