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bcf2681b03
* 👌 IMPROVE: Add some pacbio test files * 📦 NEW: Add pbbam/pbmerge module * 🐛 FIX: Add optional arguments to command line * 👌 IMPROVE: Update to last templates version * 👌 IMPROVE: Update module to last template version * 👌 IMPROVE: Update test data config and test script * 👌 IMPROVE: Remove useless index + Fix Typos * 👌 IMPROVE: Add some pacbio test files * 📦 NEW: Add pbbam/pbmerge module * 🐛 FIX: Add optional arguments to command line * 👌 IMPROVE: Update to last templates version * 👌 IMPROVE: Update module to last template version * 👌 IMPROVE: Update test data config and test script * 👌 IMPROVE: Remove useless index + Fix Typos * 👌 IMPROVE: Update and clean code * 🐛 FIX: Update module path in test * 🐛 FIX: Add missing () + correct module path in test * 👌 IMPROVE: Update pbmerge from version 1.6.0 to 1.7.0 * 👌 IMPROVE: Change output filename suffix for something more generic * 🐛 Update test.yml * Apply suggestions from code review * Update tests/modules/pbbam/pbmerge/test.yml * Update tests/modules/pbbam/pbmerge/main.nf Co-authored-by: Gregor Sturm <mail@gregor-sturm.de> Co-authored-by: Robert A. Petit III <robbie.petit@gmail.com> Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com>
10 lines
380 B
YAML
10 lines
380 B
YAML
- name: pbbam pbmerge test_pbbam_pbmerge
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command: nextflow run tests/modules/pbbam/pbmerge -entry test_pbbam_pbmerge -c tests/config/nextflow.config
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tags:
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- pbbam/pbmerge
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- pbbam
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files:
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- path: output/pbbam/test.merged.bam
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md5sum: 727c7ba1289192085c06890dda70f973
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- path: output/pbbam/test.merged.bam.pbi
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md5sum: edfadd3a81c598d1ee051899792db75d
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