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James A. Fellows Yates daab0a77dd
Add HAMRONIZATION/FARGENE and updates all HARMONIZATION tools to 1.1.1 (#2107) 
* Update main.nf

* Update meta.yml

* Re-add logos as not staged in a way that works with MultiQC config files

* Update main.nf

* Remove now unnecessary input channel

* Remove unused channel from tests

* Update hAMRonization to 1.1.1 and add hAMRonization farGene

* Fix hamronizatio ntests

* Prettier

* Fix fargene linting

* Correct file

* Fix fargene output

* Apply suggestions from code review

Co-authored-by: Jasmin F <73216762+jasmezz@users.noreply.github.com>

* Fix summarise tests

* Prettier

Co-authored-by: Jasmin F <73216762+jasmezz@users.noreply.github.com>
2022-09-27 15:32:18 +02:00
..
config Add HAMRONIZATION/FARGENE and updates all HARMONIZATION tools to 1.1.1 (#2107) 2022-09-27 15:32:18 +02:00
modules Add HAMRONIZATION/FARGENE and updates all HARMONIZATION tools to 1.1.1 (#2107) 2022-09-27 15:32:18 +02:00
subworkflows/nf-core refactor: rename and update subworkflow 2022-05-11 19:24:16 +02:00
test_versions_yml.py Update Git SHA messagre 2022-06-10 11:01:40 +00:00